CDS

Accession Number TCMCG007C39214
gbkey CDS
Protein Id XP_033129610.1
Location join(23094520..23095054,23095142..23095361,23095437..23095547,23095655..23095844,23096001..23096307,23096636..23096856,23097068..23097124,23097238..23097318,23097418..23097481,23097565..23097664,23097754..23097837,23097919..23098006,23098092..23098214,23098289..23098381,23098461..23098763)
Gene LOC103874517
GeneID 103874517
Organism Brassica rapa

Protein

Length 858aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033273719.1
Definition ATP-dependent DNA helicase Q-like SIM isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category L
Description Belongs to the helicase family. RecQ subfamily
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10900        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009378        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043138        [VIEW IN EMBL-EBI]
GO:0043140        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGAGCTAGATTCGTCTTCTGTCGAGGTTGTGATGAAGCTTGTCGAAATGGGTTTTGCAAAACTGGATGCTTTGGAAGCTGTAAAAGCTGTAGGGAAGTCATGTGGTGACGCTGTTGAGTATCTTCTGAAGAGAACTGGTGGATTCTCTTCTGCTAGTTCACTATGTTCTGCAAAGAATAATAGTAACAAGACCCTTGGCAAGAGATCTTTGCCGTCTTCGTTTGCCTCCGGTTCAATGCGGCAATCGAGTCTCCTTGACCATTTTGGATCCGTGGATAAGAACAAGAAGAAATGCGTCAGCTTTGGGACTGCAGTAGTGTCTGATCCTTCAGAAGAGATGAGAAAGTCTCCTCCTTTGGTGTTTACTGAGTCAAGTGGTTGCTCAGAGGGTTCGTCAACTTGGGAGATAAGTGTTAATTCTATACTACGGAACCGGTTTGGTATTTCGTCCCTGAAAAGTTTCCAAAGGGAGGCTTTGTCAACGTGGGTTGCTCACAAGGACTGTCTTGTTCTAGCTGCAACAGGATCTGGAAAATCTCTTTGCTTTCAGATTCCTGCATTACTGACTGGAAAAGTTGTTGTCGTGATCTCGCCTTTGATAAGCCTGATGCATGATCAGTGCCTTAAGCTGTCAACGCACAAAGTCTCTGCTTGTTTTCTTGGTTCAGGCCAGCTTGATAATCGTATAGAACAGAAGGCAATGCAGGGAATGTATCAGATCATATATGTTTGCCCTGAGACAGTGATTCGACTGATTAAACCACTCCAGAAGCTTGCAAAAACTCATGGAATTGCTCTTTTTGCTATTGATGAAGCTCATTGCGTATCAAAGTGGGGACATGACTTTCGTCCGGACTATAGGAAACTATCTATGTTGCGGGAAAACTTTTGTGCCAGCAGTCTGGCGTTCTTGGAGTATGATGTACCGATAATGGCATTGACTGCAACAGCCACAGCTCATGTACAGGAAGATATTCTTGACTCACTTCACCTGTCAAAGGAAACAAAAACTGTGCTTACTTCTTTTTTCAGGCCAAATTTACAATTTTCAGTCAAACATAGTAGAACAAAGTCTGCAGCTTCATATGCAAAGGACTTCCAAAACTTGATTGATTTATACTCTGGAAAGAGAAAGGCTACCGGGAAAAAGCTAGCAGTAATCTCACAAGGGTCAGAGGGGCAGAGTGATTTTGGTTATCACGATGCTGAAAACATCCATGAGACAGATAATGATGATGATGATGAAGAGGATCCGGAGAACTCTGTGGCAAAGCAAAACAGTTCAAATGGGAAAGAAATGTCAGAAGAGTATCTGGAAGATGAGACCGACATCTTCCAGAGTGTTGATGATTGGGATGTTGCTTGTGGCGAGTTCTGTGCAATGTCTCCTTGTGATGTCCTGGATATTCCTGATCCTTCCGGAAAGCAGACACCTGATGAATCTGGGCACAATCATAGTAACAAGGCGAAGAATCTTGAAGGACCGACAATTATTTACGTTCCTACAAGAAAGGAGAGTGTAAACGTCGCAAAATATCTCTCTGGGATTGGACTGAAGGCTGCAGCTTATAATGCAAAGTTGCCTAAAAAACATCTCAGACAAGTTCACCAAGAATTTCACGAAGATAAGCTGCAGGTTGTTGTTGCCACCATTGCGTTTGGAATGGGAATTGACAAGAAAAATGTCCGGAAAATCATCCATTATGGTTGGCCGCAGAGCTTGGAAGCATACTACCAAGAAGCTGGTCGAGCTGGAAGAGATGGGGAACTGGCTGAGTGCGTGCTCTATGCTAATCTATCGAGAGTACCAACACTTTTGCCGAGCCGTAGGAGCAAAGAACAGACAGAACAAGCTTACAAGATGCTATCTGATTGCTTCAGATACGGAATGAATACTTCACAGTGTCGAGCGAAAATACTCGTGGAGTACTTTGGGGAGGATTTCACTTCCAAGAAGTGTAACTTATGCGATGTTTGCACTAAAGGGCCTCCAGAGCAAGTTAATGTACGAGAGGAAGCTAATCTTTTGTTTCAAGTAATCTCTGCCTTTCACTTGCAGGCAGAGAATAGCTCTGAGCATGCATCATGTCAAGATTACGGACTCGGCAACAGCAAACAGAAGAAGTTATCTGACAAACCGAATCTTTTCTTCTTCATCAATAGAATCAGGGAGCAGTCCAAAAAGTTCATGGAGATAGATCGTCTTTGGTGGAAAGGTCTTGCCCGTATCATGGAAGCCGAGGGATACATCAAAGAGATGGACAACAAGTCTCGTCGAGTTGAGATAGCTTTTATAGAGCCAACAGAAAAGGGGAGGAAGCAACTAGCTTTGGAAGATGACAAGCCACTCTATGTATACCCAGAAGCAGACATGCTGGTTTCATTGAGACAACGCAGAACATACAGCGGATTCTCATCTTGGGGAAAAGGATGGGCAGATCCAGAGATCAGACGCCAACGGTTAGAGACAATGAAACGCCCAAGAGAAAGGAAGCCACGAAGAGAACGATCACGTCAACAACAACGTCCTTTGAAGTTTCAGAAGAATGTTCCACGGAAAAGCAAAGAATAA
Protein:  
MEELDSSSVEVVMKLVEMGFAKLDALEAVKAVGKSCGDAVEYLLKRTGGFSSASSLCSAKNNSNKTLGKRSLPSSFASGSMRQSSLLDHFGSVDKNKKKCVSFGTAVVSDPSEEMRKSPPLVFTESSGCSEGSSTWEISVNSILRNRFGISSLKSFQREALSTWVAHKDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLSTHKVSACFLGSGQLDNRIEQKAMQGMYQIIYVCPETVIRLIKPLQKLAKTHGIALFAIDEAHCVSKWGHDFRPDYRKLSMLRENFCASSLAFLEYDVPIMALTATATAHVQEDILDSLHLSKETKTVLTSFFRPNLQFSVKHSRTKSAASYAKDFQNLIDLYSGKRKATGKKLAVISQGSEGQSDFGYHDAENIHETDNDDDDEEDPENSVAKQNSSNGKEMSEEYLEDETDIFQSVDDWDVACGEFCAMSPCDVLDIPDPSGKQTPDESGHNHSNKAKNLEGPTIIYVPTRKESVNVAKYLSGIGLKAAAYNAKLPKKHLRQVHQEFHEDKLQVVVATIAFGMGIDKKNVRKIIHYGWPQSLEAYYQEAGRAGRDGELAECVLYANLSRVPTLLPSRRSKEQTEQAYKMLSDCFRYGMNTSQCRAKILVEYFGEDFTSKKCNLCDVCTKGPPEQVNVREEANLLFQVISAFHLQAENSSEHASCQDYGLGNSKQKKLSDKPNLFFFINRIREQSKKFMEIDRLWWKGLARIMEAEGYIKEMDNKSRRVEIAFIEPTEKGRKQLALEDDKPLYVYPEADMLVSLRQRRTYSGFSSWGKGWADPEIRRQRLETMKRPRERKPRRERSRQQQRPLKFQKNVPRKSKE